This is the LaTeX PhD Thesis template for Indian Institute of Technology Kharagpur. For more information on preparing your thesis for your department (if it has some different rules), it is better to contact the senior research scholars/ supervisor.
You can also follow the same pattern for your MS thesis.
\documentclass[12pt,a4paper, twoside, openright,titlepage]{book}
%-----------------------------------------------------------------------------------------
%---------------------------------- packages ---------------------------------------------
%-----------------------------------------------------------------------------------------
%\usepackage{caption2}
\usepackage{mathdots}
\usepackage{thesis}
\usepackage{tabularx}
\usepackage{comment}
\usepackage{hyperref}
\usepackage{rotating}
\usepackage{amssymb}
\usepackage{latexsym}
%\usepackage[pdftex]{graphicx}
%% Added two
\usepackage{epsfig}
%\usepackage{subfigure}
\usepackage{xcolor}
\usepackage{url}
\raggedbottom
\usepackage{fancyhdr}
% added instead
\usepackage{caption}
\usepackage{subcaption}
\usepackage{array}
\usepackage{multirow}
\usepackage{enumerate}
\usepackage{pdflscape}
\usepackage{amsmath,graphicx,algorithm,algpseudocode,amsfonts}
\usepackage{epstopdf}
\usepackage[flushleft]{threeparttable}
\usepackage{float}
\floatstyle{ruled}
\newfloat{Algorithms}{!thb}{lop}
\floatname{Algorithms}{Algorithm}
\allowdisplaybreaks[1]
% Example definitions.
% --------------------
\def\x{{\mathbf x}}
\def\L{{\cal L}}
\algnewcommand\algorithmicinput{\textbf{Input:}}
\algnewcommand\INPUT{\item[\algorithmicinput]}
\algnewcommand\algorithmicoutput{\textbf{Output:}}
\algnewcommand\OUTPUT{\item[\algorithmicoutput]}
\algnewcommand{\LineComment}[1]{\State \(\triangleright\) #1}
%------------------------------------------------------------------------------------------
%----------------------------------- style ------------------------------------------------
%------------------------------------------------------------------------------------------
\pagestyle{fancy} \lhead{} \rhead{}
\fancyhead[LO]{\bfseries\rightmark}
\fancyhead[RE]{\bfseries\leftmark}
\oddsidemargin 0.5in \evensidemargin 0.0in
\setcounter{secnumdepth}{3}
\setcounter{tocdepth}{3}
% \renewcommand{\baselinestretch}{1}
%\setcaptionwidth{0.9\textwidth}
\newtheorem{thm}{Theorem}
\newtheorem{rem}{Remark}
\newtheorem{pr}{Proof}
\newtheorem{lem}{Lemma}
%------------------------------------------------------------------------------------------
%------------------------------------- start ----------------------------------------------
%------------------------------------------------------------------------------------------
\usepackage{setspace}
\begin{document}
%\pagenumbering{none}
\setcounter{page}{1}
\pagenumbering{roman}
%------------------------------------------------------------------------------------------
%----------------------------------- cover page -------------------------------------------
%------------------------------------------------------------------------------------------
\include{HeadTail/coverpage}
\cleardoublepage
\setcounter{page}{1}
\pagenumbering{roman}
%------------------------------------------------------------------------------------------
%----------------------------- Title ------------------------------------------------------
%------------------------------------------------------------------------------------------
%\addcontentsline{toc}{chapter}{Title Page}
\include{HeadTail/title} \cleardoublepage
\cfoot{\thepage}
\begin{spacing}{1.1}
%------------------------------------------------------------------------------------------
%------------------------------------ Dedication ------------------------------------------
%------------------------------------------------------------------------------------------
\include{HeadTail/dedication} \cleardoublepage
%------------------------------------------------------------------------------------------
%------------------------------ Certificate -----------------------------------------------
%------------------------------------------------------------------------------------------
\include{HeadTail/approvalcert} \cleardoublepage
% \addcontentsline{toc}{chapter}{Certificate by the Supervisor}
\include{HeadTail/cert} \cleardoublepage
%------------------------------------------------------------------------------------------
%--------------------------------- declaration --------------------------------------------
%------------------------------------------------------------------------------------------
% \addcontentsline{toc}{chapter}{Declaration}
\include{HeadTail/declaration} \cleardoublepage
%------------------------------------------------------------------------------------------
%----------------------- ack --------------------------------------------------------------
%------------------------------------------------------------------------------------------
% \addcontentsline{toc}{chapter}{Acknowledgement}
\include{HeadTail/ack} \cleardoublepage
%------------------------------------------------------------------------------------------
%-------------------------------- Abstract ------------------------------------------------
%------------------------------------------------------------------------------------------
\addcontentsline{toc}{chapter}{Abstract}
\include{HeadTail/Abstract}
\cleardoublepage
%------------------------------------------------------------------------------------------
%---------------------- contents ----------------------------------------------------------
%------------------------------------------------------------------------------------------
\tableofcontents
\cleardoublepage
\include{Symbol/abbreviation}
\clearpage{\pagestyle{empty}\cleardoublepage}
\thispagestyle{empty}
\listoffigures
\listoftables
\newpage
%------------------------------------------------------------------------------------------
%--------------------- page start ---------------------------------------------------------
%------------------------------------------------------------------------------------------
\setcounter{page}{1}
\pagenumbering{arabic}
%---------------------------------------------------------------------------------------------
%------------------------------------------ Chapters --------------------------------------
%------------------------------------------------------------------------------------------
\newcommand*{\ChapterOnePath}{Chapter1}
\newcommand*{\ChapterTwoPath}{Chapter2}
\include{\ChapterOnePath/chapter_main} \label{chap:ch1}
\include{\ChapterTwoPath/chapter_main} \label{chap:ch2}
\include{conclusion} \label{chap:conclusion}
\end{spacing}
\begin{appendix}
\include{Appendix/Appendix1}
\clearpage{\pagestyle{empty}\cleardoublepage} \end{appendix}
%\renewcommand{\chaptername}{Chapter} %%%%%%%%%%%%%%%%%%%%%%%%%%%%
\cleardoublepage
\lhead{} \rhead{}
%------------------------------------------------------------------------------------------
%----------------------------- references -------------------------------------------------
%------------------------------------------------------------------------------------------
% \begin{small}
% \bibliographystyle{acm}
% \bibliography{references}
% \end{small}
%\bibliographystyle{plain}
%\bibliography{reference}
\chapter*{References}{}
\renewcommand{\section}[2]{}% to remove the references heading
\bibliographystyle{IEEEtran}
\renewcommand{\chaptername}{}
\bibliography{References/ref1,References/ref2}
%%%%%%%------------------------------------------------------------------------------------------
%%%%%%%--------------------------------- publication --------------------------------------------
%%%%%%%------------------------------------------------------------------------------------------
\include{HeadTail/publication}
\begin{spacing}{1.25}
%%%%%%%------------------------------------------------------------------------------------------
%%%%%%%--------------------------------- biodata ------------------------------------------------
%%%%%%%------------------------------------------------------------------------------------------
\include{HeadTail/biodata}
\end{spacing}
%------------------------------------------------------------------------------------------
%---------------------------------- END ---------------------------------------------------
%------------------------------------------------------------------------------------------
\end{document}
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%================================= Finish =================================================
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